6OS1 Membrane Protein date May 01, 2019
title Structure Of Synthetic Nanobody-Stabilized Angiotensin II Ty Receptor Bound To Trv023
authors L.M.Wingler, D.P.Staus, M.A.Skiba, C.Mcmahon, A.L.W.Kleinhenz, R.J.Lefkowitz, A.C.Kruse
compound source
Molecule: Type-1 Angiotensin II Receptor,Soluble Cytochrome Fusion Protein;
Chain: A
Synonym: At1ar,At1br,Angiotensin II Type-1 Receptor,At1,Cyt 562;
Engineered: Yes
Organism_scientific: Homo Sapiens, Escherichia Coli
Organism_common: Human
Organism_taxid: 9606, 562
Gene: Agtr1, Agtr1a, Agtr1b, At2r1, At2r1b, Cybc
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Expi293
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcdna-Zeo-Teto

Molecule: Nanobody Nb.At110i1_le
Chain: D
Engineered: Yes

Organism_scientific: Synthetic Construct
Organism_taxid: 32630
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)

Molecule: Trv023 Peptide
Chain: B
Engineered: Yes

Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
symmetry Space Group: I 2 2 2
R_factor 0.239 R_Free 0.282
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.670 101.990 227.590 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.79 Å
ligand CLR, OLC, SAR enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (173 Kb) [Save to disk]
  • Biological Unit Coordinates (6os1.pdb1.gz) 166 Kb
  • LPC: Ligand-Protein Contacts for 6OS1
  • CSU: Contacts of Structural Units for 6OS1
  • Structure Factors (541 Kb)
  • Retrieve 6OS1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6OS1 from S2C, [Save to disk]
  • View 6OS1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6OS1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6os1_A] [6os1_D] [6os1_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6OS1
  • Community annotation for 6OS1 at PDBWiki (http://pdbwiki.org)

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