6OTN Structural Protein date May 03, 2019
title Crystal Structure Of An N-Terminal Fragment Of Cancer Associ Tropomyosin 3.1 (Tpm3.1)
authors M.J.Rynkiewicz, A.Ghosh, W.J.Lehman, M.Janco, P.W.Gunning
compound source
Molecule: Tropomyosin Alpha-3 Chain
Chain: A, B, C, D
Synonym: Gamma-Tropomyosin,Tropomyosin-3,Tropomyosin-5,Htm5
Engineered: Yes
Mutation: Yes
Other_details: The Construct Contains An N-Terminal Ala-Ser By Residues Ala2-Ala80 Of Tpm3.1 With An A80c Mutation
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tpm3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 43 21 2
R_factor 0.235 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
97.201 97.201 93.100 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk]
  • Biological Unit Coordinates (6otn.pdb1.gz) 49 Kb
  • Biological Unit Coordinates (6otn.pdb2.gz) 52 Kb
  • CSU: Contacts of Structural Units for 6OTN
  • Structure Factors (122 Kb)
  • Retrieve 6OTN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6OTN from S2C, [Save to disk]
  • View 6OTN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6OTN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6otn from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6otn_D] [6otn_A] [6otn_B] [6otn_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6OTN
  • Community annotation for 6OTN at PDBWiki (http://pdbwiki.org)

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