6OW3 Transcription Dna Rna date May 09, 2019
title X-Ray Crystal Structure Of A Bacterial Reiterative Transcrip Complex Of Pyrg Promoter Variant -1t
authors Y.Shin, K.S.Murakami
compound source
Molecule: Dna-Directed Rna Polymerase Subunit Alpha
Chain: A, B
Synonym: Rnap Subunit Alpha,Rna Polymerase Subunit Alpha, Transcriptase Subunit Alpha;
Ec: 2.7.7.6
Organism_scientific: Thermus Thermophilus
Organism_taxid: 274

Molecule: Dna-Directed Rna Polymerase Subunit Beta
Chain: C
Synonym: Rnap Subunit Beta,Rna Polymerase Subunit Beta,Tran Subunit Beta;
Ec: 2.7.7.6

Organism_scientific: Thermus Thermophilus
Organism_taxid: 274

Molecule: Dna-Directed Rna Polymerase Subunit Beta'
Chain: D
Synonym: Rnap Subunit Beta',Rna Polymerase Subunit Beta', Transcriptase Subunit Beta';
Ec: 2.7.7.6

Organism_scientific: Thermus Thermophilus
Organism_taxid: 274

Molecule: Dna-Directed Rna Polymerase Subunit Omega
Chain: E
Synonym: Rnap Omega Subunit,Rna Polymerase Omega Subunit, Transcriptase Subunit Omega;
Ec: 2.7.7.6

Organism_scientific: Thermus Thermophilus
Organism_taxid: 274

Molecule: Rna Polymerase Sigma Factor Siga
Chain: F

Organism_scientific: Thermus Thermophilus
Organism_taxid: 274

Molecule: Dna (5'- D(Pgpcpaptpcpapgpapgpcpcpcptpapapa)-3');
Chain: G
Engineered: Yes

Synthetic: Yes
Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423

Molecule: Dna (5'- D(Tpaptpapaptpgpgpgpgpaptpcptpgpaptpgpc)
Chain: H
Engineered: Yes

Synthetic: Yes
Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423

Molecule: Rna (5'-D((Gtp))-R(Pgpgpg)-3')
Chain: I
Engineered: Yes

Synthetic: Yes
Organism_scientific: Thermus Thermophilus
Organism_taxid: 274
symmetry Space Group: C 1 2 1
R_factor 0.217 R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
186.187 101.833 295.755 90.00 98.64 90.00
method X-Ray Diffractionresolution 2.77 Å
ligand GTP, MG, POP, ZN enzyme Transferase E.C.2.7.7.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


C


D


E


F
  • bacterial sigma factor activ...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (578 Kb) [Save to disk]
  • Biological Unit Coordinates (6ow3.pdb1.gz) 569 Kb
  • LPC: Ligand-Protein Contacts for 6OW3
  • CSU: Contacts of Structural Units for 6OW3
  • Structure Factors (3641 Kb)
  • Retrieve 6OW3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6OW3 from S2C, [Save to disk]
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  • Visual 3D analysis of 6OW3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ow3_C] [6ow3_D] [6ow3_E] [6ow3_H] [6ow3_A] [6ow3_B] [6ow3_F] [6ow3_G] [6ow3_I]
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