6P3W Cell Cycle date May 24, 2019
title Crystal Structure Of The Cyclin A-Cdk2-Orc1 Complex
authors B.Wang, J.Song
compound source
Molecule: Cyclin-Dependent Kinase 2
Chain: A, C
Synonym: Cell Division Protein Kinase 2,P33 Protein Kinase
Ec: 2.7.11.22
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cdk2, Cdkn2
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008

Molecule: Cyclin-A2
Chain: B, D
Synonym: Cyclin-A,Cyclin A
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ccna2, Ccn1, Ccna
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008

Molecule: Orc1 Peptide
Chain: E, F
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
symmetry Space Group: P 62 2 2
R_factor 0.198 R_Free 0.237
crystal
cell
length a length b length c angle alpha angle beta angle gamma
186.396 186.396 214.707 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.54 Å
ligand PO4 enzyme Transferase E.C.2.7.11.22 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (382 Kb) [Save to disk]
  • Biological Unit Coordinates (6p3w.pdb1.gz) 190 Kb
  • Biological Unit Coordinates (6p3w.pdb2.gz) 186 Kb
  • LPC: Ligand-Protein Contacts for 6P3W
  • CSU: Contacts of Structural Units for 6P3W
  • Structure Factors (2065 Kb)
  • Retrieve 6P3W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6P3W from S2C, [Save to disk]
  • View 6P3W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6P3W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6p3w_A] [6p3w_F] [6p3w_B] [6p3w_D] [6p3w_C] [6p3w_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6P3W
  • Community annotation for 6P3W at PDBWiki (http://pdbwiki.org)

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