6P50 Immune System date May 29, 2019
title Crystal Structure Of A Complex Of Human Il-7ralpha With An A 7ralpha Fab 4a10
authors S.T.R.Walsh, L.Kashi, C.L.Kohnhorst
compound source
Molecule: Interleukin-7 Receptor Subunit Alpha
Chain: C
Synonym: Il-7ra,Cdw127
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Il7r
Expression_system: Drosophila Melanogaster
Expression_system_taxid: 7227
Expression_system_variant: Schneider S2

Molecule: Anti-Il-7r 4a10 Fab Heavy Chain
Chain: H
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090

Molecule: Anti-Il-7r 4a10 Fab Light Chain
Chain: L
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
symmetry Space Group: C 1 2 1
R_factor 0.286 R_Free 0.330
crystal
cell
length a length b length c angle alpha angle beta angle gamma
145.113 40.171 105.097 90.00 105.48 90.00
method X-Ray Diffractionresolution 2.90 Å
ligand NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
C


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (176 Kb) [Save to disk]
  • Biological Unit Coordinates (6p50.pdb1.gz) 168 Kb
  • LPC: Ligand-Protein Contacts for 6P50
  • CSU: Contacts of Structural Units for 6P50
  • Structure Factors (159 Kb)
  • Retrieve 6P50 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6P50 from S2C, [Save to disk]
    • View 6P50 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6P50
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6p50_C] [6p50_L] [6p50_H]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6P50
  • Community annotation for 6P50 at PDBWiki (http://pdbwiki.org)

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