6PBD Transferase Dna date Jun 13, 2019
title Dna N6-Adenine Methyltransferase Ccrm In Complex With Double Dna Oligonucleotide Containing Its Recognition Sequence Gaa
authors J.R.Horton, X.Cheng, C.B.Woodcock
compound source
Molecule: Modification Methylase Ccrmi
Chain: A, B
Synonym: M.Ccrmi, Adenine-Specific Methyltransferase Ccrmi
Engineered: Yes
Organism_scientific: Caulobacter Vibrioides
Organism_taxid: 155892
Gene: Ccrmim, Ccrm, Cc_0378
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Plus

Molecule: Dna (5'- D(Cpgpaptptpcpapaptpgpapaptpcpcpcpapapg)
Chain: X
Engineered: Yes

Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630

Molecule: Dna (5'- D(Gpcptptpgpgpgpaptptpcpaptptpgpapaptpc)
Chain: Y
Engineered: Yes

Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
symmetry Space Group: P 21 21 21
R_factor 0.173 R_Free 0.208
length a length b length c angle alpha angle beta angle gamma
67.683 117.939 119.598 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.34 Å
ligand EDO, SFG enzyme Transferase E.C. BRENDA
A, B
  • site-specific DNA-methyltran...

  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (266 Kb) [Save to disk]
  • Biological Unit Coordinates (6pbd.pdb1.gz) 257 Kb
  • LPC: Ligand-Protein Contacts for 6PBD
  • CSU: Contacts of Structural Units for 6PBD
  • Structure Factors (801 Kb)
  • Retrieve 6PBD in mmCIF format [Save to disk]
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  • Dipole moment, from Dipole Server at Weizmann Institute
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  • Fold representative 6pbd from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6pbd_A] [6pbd_X] [6pbd_Y] [6pbd_B]
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