6PEN Motor Protein date Jun 20, 2019
title Structure Of Spastin Hexamer (Whole Model) In Complex With S Peptide
authors H.Han, H.L.Schubert, J.Mccullough, N.Monroe, W.I.Sundquist, C.P.H
compound source
Molecule: Spastin
Chain: A, B, C, D, E, F
Synonym: Spastic Paraplegia 4 Protein
Ec: 5.6.1.1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Spast, Adpsp, Fsp2, Kiaa1083, Spg4
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Eyeyeyeyey
Chain: G
Engineered: Yes
Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 4.20 Å
ligand ADP, BEF, MG enzyme Isomerase E.C.5.6.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (238 Kb) [Save to disk]
  • Biological Unit Coordinates (6pen.pdb1.gz) 227 Kb
  • LPC: Ligand-Protein Contacts for 6PEN
  • CSU: Contacts of Structural Units for 6PEN
  • Retrieve 6PEN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6PEN from S2C, [Save to disk]
    • View 6PEN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6PEN
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6pen_C] [6pen_E] [6pen_D] [6pen_A] [6pen_G] [6pen_F] [6pen_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6PEN
  • Community annotation for 6PEN at PDBWiki (http://pdbwiki.org)

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