6PMO Co-crystal structure of the Geobacillus kaustophilus glyQ T-box riboswitch discriminator domain in complex with tRNA-Gly date
authors Li, S., Zhang, J.
compound source
symmetry
R_factor
R_Free 0.272581164281
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.66
ligand IR, MG enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (125 Kb) [Save to disk]
  • Biological Unit Coordinates (6pmo.pdb1.gz) 119 Kb
  • LPC: Ligand-Protein Contacts for 6PMO
  • CSU: Contacts of Structural Units for 6PMO
  • Structure Factors (360 Kb)
  • Retrieve 6PMO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6PMO from S2C, [Save to disk]
    • View 6PMO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6PMO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6pmo_B] [6pmo_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6PMO
  • Community annotation for 6PMO at PDBWiki (http://pdbwiki.org)

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