6POJ Transport Protein date Jul 04, 2019
title Structural Refinement Of Aquaporin 1 Via Ssnmr
authors D.A.Dingwell, L.S.Brown, V.Ladizhansky
compound source
Molecule: Aquaporin-1
Chain: A
Synonym: Aqp-1,Aquaporin-Chip,Urine Water Channel,Water Cha Protein For Red Blood Cells And Kidney Proximal Tubule;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Aqp1, Chip28
Expression_system: Komagataella Pastoris
Expression_system_taxid: 4922
Expression_system_strain: Smd1168h
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ppiczb
methodSolid-State NMR
Gene
Ontology
ChainFunctionProcessComponent
A
  • intracellular cGMP activated...
  • potassium channel activity
  • ammonium transmembrane trans...
  • potassium ion transmembrane ...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (740 Kb) [Save to disk]
  • Biological Unit Coordinates (6poj.pdb1.gz) 75 Kb
  • CSU: Contacts of Structural Units for 6POJ
  • Original NMR restraints for 6POJ from PDB
  • Retrieve 6POJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6POJ from S2C, [Save to disk]
  • View 6POJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6POJ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6poj from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6poj_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6POJ
  • Community annotation for 6POJ at PDBWiki (http://pdbwiki.org)

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