6POL Signaling Protein date Jul 04, 2019
title Crystal Structure Of The Human Nell1 Egf1-3-Robo3 Fn1 Comple
authors J.Wang, J.S.Pak, E.Ozkan
compound source
Molecule: Roundabout Homolog 3
Chain: A, C, E
Synonym: Roundabout-Like Protein 3
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Robo3
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111
Expression_system_cell_line: High Five Cells
Expression_system_vector_type: Baculovirus

Molecule: Protein Kinase C-Binding Protein Nell1
Chain: B, D, F
Synonym: Nel-Like Protein 1,Nel-Related Protein 1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nell1, Nrp1
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111
Expression_system_cell_line: High Five Cells
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 31 2 1
R_factor 0.230 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.000 87.000 211.300 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.80 Å
ligand CA, GOL, NAG, NO3 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, E


F, D, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (238 Kb) [Save to disk]
  • Biological Unit Coordinates (6pol.pdb1.gz) 78 Kb
  • Biological Unit Coordinates (6pol.pdb2.gz) 77 Kb
  • Biological Unit Coordinates (6pol.pdb3.gz) 77 Kb
  • LPC: Ligand-Protein Contacts for 6POL
  • CSU: Contacts of Structural Units for 6POL
  • Structure Factors (1333 Kb)
  • Retrieve 6POL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6POL from S2C, [Save to disk]
    • View 6POL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6POL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6pol_C] [6pol_D] [6pol_B] [6pol_A] [6pol_E] [6pol_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6POL
  • Community annotation for 6POL at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science