6PSI Chaperone date Jul 12, 2019
title Structural Basis For Client Recognition And Activity Of Hsp4 Chaperones
authors Y.Jiang, P.Rossi, C.G.Kalodimos
compound source
Molecule: Chaperone Protein Dnaj 2
Chain: A, C
Engineered: Yes
Organism_scientific: Thermus Thermophilus (Strain Hb8 Atc Dsm 579);
Organism_taxid: 300852
Strain: Hb8 Atcc 27634 Dsm 579
Gene: Dnaj2, Ttha1489
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)

Molecule: Alkaline Phosphatase
Chain: B
Synonym: Bacterial Alkaline Phosphatase
Ec: 3.1.3.1
Engineered: Yes

Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Phoa, Acu57_12080, Auq13_18595, Banra_02023, Banra_03 Bet08_14335, Bhf46_20915, Bue81_15475, C4j69_09555, C5n07_1 Ca593_01230, D0x26_07375, D3821_12940, Dnq41_05820, Eai52_0 Ec3234a_4c00530, Ec3426_01222, Ecto6_03716, Ed648_16735, Eep23_01005, El75_3367, El79_3462, El80_3416, Nctc13462_019 Nctc9037_03964, Nctc9062_04458, Rk56_026750, Samea3753300_0 Un91_18770;
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.1.3.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (6144 Kb) [Save to disk]
  • Biological Unit Coordinates (6psi.pdb1.gz) 309 Kb
  • CSU: Contacts of Structural Units for 6PSI
  • Original NMR restraints for 6PSI from PDB
  • Retrieve 6PSI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6PSI from S2C, [Save to disk]
  • View 6PSI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6PSI
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6psi from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6psi_B] [6psi_C] [6psi_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6PSI
  • Community annotation for 6PSI at PDBWiki (http://pdbwiki.org)

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