6PYE date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EDO, K, P5Y, ZN enzyme
Primary referenceMulticomponent Synthesis, Binding Mode, and Structure-Activity Relationship of Selective Histone Deacetylase 6 (HDAC6) Inhibitors with Bifurcated Capping Groups., Ressing N, Sonnichsen M, Osko JD, Scholer A, Schliehe-Diecks J, Skerhut A, Borkhardt A, Hauer J, Kassack MU, Christianson DW, Bhatia S, Hansen FK, J Med Chem. 2020 Sep 24;63(18):10339-10351. doi: 10.1021/acs.jmedchem.9b01888., Epub 2020 Sep 1. PMID:32803970
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (136 Kb) [Save to disk]
  • Biological Unit Coordinates (6pye.pdb1.gz) 68 Kb
  • Biological Unit Coordinates (6pye.pdb2.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 6PYE
  • CSU: Contacts of Structural Units for 6PYE
  • Structure Factors (3508 Kb)
  • Retrieve 6PYE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6PYE from S2C, [Save to disk]
    • View 6PYE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6pye_A] [6pye_B]
  • SWISS-PROT database:

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