6Q0W	Ligase	date	Aug 02, 2019
title	Structure Of Ddb1-Dda1-Dcaf15 Complex Bound To Indisulam And
authors	T.Faust, H.Yoon, R.P.Nowak, K.A.Donovan, Z.Li, Q.Cai, N.A.Eleuteri N.S.Gray, E.S.Fischer
compound		source
Molecule: Dna Damage-Binding Protein 1 Chain: A Fragment: Internal Deletion Of The Bpb Domain Synonym: Ddb P127 Subunit,Dna Damage-Binding Protein A,Ddba Specific Dna-Binding Protein 1,Hbv X-Associated Protein 1,X Damaged Dna-Binding Factor,Uv-Damaged Dna-Binding Protein 1 Xpe-Binding Factor,Xpe-Bf,Xeroderma Pigmentosum Group E-Com Protein,Xpce; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ddb1, Xap1 Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: Ddb1- And Cul4-Associated Factor 15 Chain: B Fragment: N-Terminal Domain Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dcaf15, C19orf72 Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: Ddb1- And Cul4-Associated Factor 15 Chain: C Fragment: C-Terminal Domain Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dcaf15, C19orf72 Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: Rna-Binding Protein 39 Chain: D Fragment: Rrm2 Domain Synonym: Caper Alpha,Hepatocellular Carcinoma Protein 1,Rna Motif Protein 39,Rna-Binding Region-Containing Protein 2,Sp Factor Hcc1; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rbm39, Hcc1, Rnpc2 Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: Det1- And Ddb1-Associated Protein 1 Chain: E Synonym: Placenta Cross-Immune Reaction Antigen 1,Pcia-1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dda1, C19orf58, Pcia1 Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
symmetry	Space Group: P 21 21 21	R_factor 0.238 R_Free 0.264
crystal cell	length a length b length c angle alpha angle beta angle gamma 93.973 81.799 260.978 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.90 Å
Gene Ontology	Chain Function Process Component A C, B D E

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (468 Kb) [Save to disk] Biological Unit Coordinates (6q0w.pdb1.gz) 459 Kb CSU: Contacts of Structural Units for 6Q0W Structure Factors (2729 Kb) Retrieve 6Q0W in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6Q0W from S2C, [Save to disk]

View 6Q0W in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6Q0W

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute Fold representative 6q0w from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6q0w_A] [6q0w_B] [6q0w_C] [6q0w_D] [6q0w_E] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 6Q0W

Community annotation for 6Q0W at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014 Bioinformatics Unit Weizmann Institute of Science

---