6QE3 Protein Binding date Jan 04, 2019
title Re-Refinement Of 6esr Human Iba57 At 1.75 A Resolution
authors V.Calderone, S.Ciofi-Baffoni, S.Gourdoupis, L.Banci
compound source
Molecule: Putative Transferase Caf17, Mitochondrial
Chain: A
Synonym: Iron-Sulfur Cluster Assembly Factor Homolog
Ec: 2.1.-.-
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Iba57, C1orf69
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor 0.175 R_Free 0.197
crystal
cell
length a length b length c angle alpha angle beta angle gamma
37.280 43.250 55.300 94.88 93.25 108.18
method X-Ray Diffractionresolution 1.75 Å
ligand
enzyme Transferase E.C.2.1 BRENDA
Primary referenceIn-house high-energy-remote SAD phasing using the magic triangle: how to tackle the P1 low symmetry using multiple orientations of the same crystal of human IBA57 to increase the multiplicity., Gourdoupis S, Nasta V, Ciofi-Baffoni S, Banci L, Calderone V, Acta Crystallogr D Struct Biol. 2019 Mar 1;75(Pt 3):317-324. doi:, 10.1107/S2059798319000214. Epub 2019 Feb 28. PMID:30950402
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (149 Kb) [Save to disk]
  • Biological Unit Coordinates (6qe3.pdb1.gz) 143 Kb
  • CSU: Contacts of Structural Units for 6QE3
  • Structure Factors (255 Kb)
  • Retrieve 6QE3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6QE3 from S2C, [Save to disk]
    • View 6QE3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6QE3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6qe3_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6QE3
  • Community annotation for 6QE3 at PDBWiki (http://pdbwiki.org)

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