6QFE Hydrolase date Jan 10, 2019
title Crystal Structure Of Human Kallikrein 5 In Complex With Gsk1
authors J.H.Thorpe
compound source
Molecule: Kallikrein-5
Chain: A, B
Synonym: Kallikrein-Like Protein 2,Klk-L2,Stratum Corneum T Enzyme;
Ec: 3.4.21.-
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Klk5, Scte, Unq570pro1132
Expression_system: Unidentified Baculovirus
Expression_system_taxid: 10469
symmetry Space Group: C 1 2 1
R_factor 0.211 R_Free 0.242
crystal
cell
length a length b length c angle alpha angle beta angle gamma
126.916 83.840 62.714 90.00 116.23 90.00
method X-Ray Diffractionresolution 1.67 Å
ligand J08, NA, NAG enzyme Hydrolase E.C.3.4.21 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk]
  • Biological Unit Coordinates (6qfe.pdb1.gz) 43 Kb
  • Biological Unit Coordinates (6qfe.pdb2.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 6QFE
  • CSU: Contacts of Structural Units for 6QFE
  • Structure Factors (2011 Kb)
  • Retrieve 6QFE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6QFE from S2C, [Save to disk]
    • View 6QFE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6QFE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6qfe_A] [6qfe_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6QFE
  • Community annotation for 6QFE at PDBWiki (http://pdbwiki.org)

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