6QNW Rna Binding Protein date Feb 12, 2019
title Influenza A Polymerase Heterotrimer Human H3n2 Northern Terr
authors J.R.Keown, H.Fan, J.M.Grimes
compound source
Molecule: Polymerase Acidic Protein
Chain: A, D, G, J
Synonym: Rna-Directed Rna Polymerase Subunit P2
Ec: 3.1.-.-
Engineered: Yes
Organism_scientific: Influenza A Virus (Anorthern Territory601968(H3n2));
Organism_taxid: 370128
Gene: Pa
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108

Molecule: Rna-Directed Rna Polymerase Catalytic Subunit
Chain: B, E, H, K
Synonym: Polymerase Basic Protein 1,Pb1,Rna-Directed Rna Po Subunit P1;
Ec: 2.7.7.48
Engineered: Yes

Organism_scientific: Influenza A Virus (Strain Anorthern Territory601968 H3n2);
Organism_taxid: 384505
Gene: Pb1
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108

Molecule: Polymerase Basic Protein 2
Chain: C, F, I, L
Synonym: Rna-Directed Rna Polymerase Subunit P3
Engineered: Yes

Organism_scientific: Influenza A Virus (Strain Anorthern Territory601968 H3n2);
Organism_taxid: 384505
Gene: Pb2
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
symmetry Space Group: C 1 2 1
R_factor 0.236 R_Free 0.279
crystal
cell
length a length b length c angle alpha angle beta angle gamma
336.480 191.895 235.735 90.00 91.50 90.00
method X-Ray Diffractionresolution 3.31 Å
ligand
enzyme Hydrolase E.C.3.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, J, D, G
  • nuclease activity
  • endonuclease activity


  • F, C, I, L
  • RNA-directed 5'-3' RNA polym...


  • K, E, B, H
  • RNA-directed 5'-3' RNA polym...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2932 Kb) [Save to disk]
  • Biological Unit Coordinates (6qnw.pdb1.gz) 739 Kb
  • Biological Unit Coordinates (6qnw.pdb2.gz) 739 Kb
  • Biological Unit Coordinates (6qnw.pdb3.gz) 743 Kb
  • Biological Unit Coordinates (6qnw.pdb4.gz) 741 Kb
  • CSU: Contacts of Structural Units for 6QNW
  • Structure Factors (4974 Kb)
  • Retrieve 6QNW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6QNW from S2C, [Save to disk]
  • View 6QNW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6QNW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6qnw from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6qnw_B] [6qnw_D] [6qnw_K] [6qnw_H] [6qnw_J] [6qnw_G] [6qnw_F] [6qnw_L] [6qnw_C] [6qnw_E] [6qnw_A] [6qnw_I]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6QNW
  • Community annotation for 6QNW at PDBWiki (http://pdbwiki.org)

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