6QP5 Transferase date Feb 13, 2019
title Apo Human Calciumcalmodulin-Dependent Kinase Type 1d
authors F.J.Sorrell, S.Knapp
compound source
Molecule: Calciumcalmodulin-Dependent Protein Kinase Type
Chain: A
Synonym: Cam Kinase I Delta,Camkid,Camki-Like Protein Kinas
Ec: 2.7.11.17
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Camk1d, Camkid
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 1 2 1
R_factor 0.192 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
66.110 45.790 107.931 90.00 105.80 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand
enzyme Transferase E.C.2.7.11.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (6qp5.pdb1.gz) 47 Kb
  • CSU: Contacts of Structural Units for 6QP5
  • Structure Factors (256 Kb)
  • Retrieve 6QP5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6QP5 from S2C, [Save to disk]
  • View 6QP5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6QP5
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6qp5 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6qp5_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6QP5
  • Community annotation for 6QP5 at PDBWiki (http://pdbwiki.org)

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