6QUA Dna Binding Protein date Feb 27, 2019
title The Complex Structure Of Hsrosr-Sg (Vng0258rosr-Sg)
authors B.Shaanan, N.Kutnowski
compound source
Molecule: Hsrosr-Dna Binding Protein
Chain: A, B, C, D
Engineered: Yes
 Organism_scientific: Halobacterium Salinarum (Strain Atcc 7 Jcm 11081 Nrc-1);
Organism_common: Halobacterium Halobium
Organism_taxid: 64091
Strain: Atcc 700922 Jcm 11081 Nrc-1
Gene: Vng_0258h
Expression_system: Haloferax Volcanii
Expression_system_taxid: 2246
Expression_system_strain: Wr341
Expression_system_vector_type: Plasmid

Molecule: Dna (28-Mer)
Chain: E, G
Engineered: Yes
Synthetic: Yes
Organism_scientific: Halobacterium Salinarum Nrc-1
Organism_taxid: 64091

Molecule: Dna (28-Mer)
Chain: F, H
Engineered: Yes
Synthetic: Yes
Organism_scientific: Halobacterium Salinarum Nrc-1
Organism_taxid: 64091
symmetry Space Group: P 1
R_factor 0.238 R_Free 0.289
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.279 84.665 90.400 81.91 87.13 75.61
method X-Ray Diffractionresolution 2.68 Å
ligand MN, SO4 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (353 Kb) [Save to disk]
  • Biological Unit Coordinates (6qua.pdb1.gz) 173 Kb
  • Biological Unit Coordinates (6qua.pdb2.gz) 172 Kb
  • LPC: Ligand-Protein Contacts for 6QUA
  • CSU: Contacts of Structural Units for 6QUA
  • Structure Factors (3714 Kb)
  • Retrieve 6QUA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6QUA from S2C, [Save to disk]
    • View 6QUA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6QUA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6qua_B] [6qua_H] [6qua_E] [6qua_C] [6qua_D] [6qua_A] [6qua_G] [6qua_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6QUA
  • Community annotation for 6QUA at PDBWiki (http://pdbwiki.org)

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