6R7H Ligase date Mar 28, 2019
title Structural Basis Of Cullin-2 Ring E3 Ligase Regulation By Th Signalosome
authors S.V.Faull, A.M.C.Lau, F.Beuron, N.B.Cronin, E.P.Morris, A.Politis
compound source
Molecule: Cop9 Signalosome Complex Subunit 1
Chain: A
Synonym: Signalosome Subunit 1,G Protein Pathway Suppressor Jab1-Containing Signalosome Subunit 1,Protein Mfh;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gps1, Cops1, Csn1
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Elongin-C
Chain: Q
Synonym: Eloc,Elongin 15 Kda Subunit,Rna Polymerase II Tran Factor Siii Subunit C,Siii P15,Transcription Elongation Fac Polypeptide 1;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Eloc, Tceb1
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Cullin-2
Chain: O
Synonym: Cul-2
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cul2
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: E3 Ubiquitin-Protein Ligase Rbx1
Chain: R
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Cop9 Signalosome Complex Subunit 2
Chain: B
Synonym: Signalosome Subunit 2,Alien Homolog,Jab1-Containin Signalosome Subunit 2,Thyroid Receptor-Interacting Protein 15;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cops2, Csn2, Trip15
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Cop9 Signalosome Complex Subunit 3
Chain: C
Synonym: Signalosome Subunit 3,Jab1-Containing Signalosome
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cops3, Csn3
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Cop9 Signalosome Complex Subunit 4
Chain: D
Synonym: Signalosome Subunit 4,Jab1-Containing Signalosome
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cops4, Csn4
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Cop9 Signalosome Complex Subunit 5
Chain: E
Synonym: Signalosome Subunit 5,Jun Activation Domain-Bindin 1;
Ec: 3.4.-.-
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cops5, Csn5, Jab1
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Cop9 Signalosome Complex Subunit 6
Chain: F
Synonym: Signalosome Subunit 6,Jab1-Containing Signalosome Mov34 Homolog,Vpr-Interacting Protein,Hvip;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cops6, Csn6, Hvip
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Cop9 Signalosome Complex Subunit 7b
Chain: G
Synonym: Signalosome Subunit 7b,Jab1-Containing Signalosome 7b;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cops7b, Csn7b
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Cop9 Signalosome Complex Subunit 8
Chain: H
Synonym: Signalosome Subunit 8,Cop9 Homolog,Hcop9,Jab1-Cont Signalosome Subunit 8;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cops8, Csn8
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Elongin-B
Chain: P
Synonym: Elob,Elongin 18 Kda Subunit,Rna Polymerase II Tran Factor Siii Subunit B,Siii P18,Transcription Elongation Fac Polypeptide 2;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Elob, Tceb2
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 8.80 Å
ligand
enzyme Hydrolase E.C.3.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
B


C


D


E
  • translation initiation facto...


  • H


    Q


    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (501 Kb) [Save to disk]
  • Biological Unit Coordinates (6r7h.pdb1.gz) 496 Kb
  • CSU: Contacts of Structural Units for 6R7H
  • Retrieve 6R7H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6R7H from S2C, [Save to disk]
  • View 6R7H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6R7H
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6r7h from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6r7h_B] [6r7h_O] [6r7h_P] [6r7h_C] [6r7h_F] [6r7h_D] [6r7h_R] [6r7h_A] [6r7h_H] [6r7h_G] [6r7h_E] [6r7h_Q]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6R7H
  • Community annotation for 6R7H at PDBWiki (http://pdbwiki.org)

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