6REP Proton Transport date Apr 12, 2019
title Cryo-Em Structure Of Polytomella F-Atp Synthase, Primary Rot 3, Composite Map
authors B.J.Murphy, N.Klusch, O.Yildiz, W.Kuhlbrandt
compound source
Molecule: Asa-10: Polytomella F-Atp Synthase Associated Sub
Chain
Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502

Molecule: Atp Synthase Associated Protein Asa1
Chain: 1

Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502

Molecule: Asa-2: Polytomella F-Atp Synthase Associated Subu
Chain: 2

Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502

Molecule: Mitochondrial F1f0 Atp Synthase Associated 32 Kda
Chain: 3

Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502

Molecule: Mitochondrial Atp Synthase Associated Protein Asa
Chain: 4

Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502

Molecule: Mitochondrial F1f0 Atp Synthase Associated 14 Kda
Chain: 5

Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502

Molecule: Mitochondrial Atp Synthase Subunit Asa6
Chain: 6

Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502

Molecule: Mitochondrial Atp Synthase Associated Protein Asa
Chain: 7

Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502

Molecule: Mitochondrial Atp Synthase Subunit Asa8
Chain: 8

Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502

Molecule: Asa-9: Polytomella F-Atp Synthase Associated Subu
Chain: 9

Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502

Molecule: Mitochondrial Atp Synthase Subunit C
Chain: A, B, C, D, E, F, G, H, I, J

Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502

Molecule: Mitochondrial Atp Synthase Subunit 6
Chain: M

Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502

Molecule: Mitochondrial Atp Synthase Subunit Oscp
Chain: P

Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502

Molecule: Epsilon: Polytomella F-Atp Synthase Epsilon Subun
Chain: Q

Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502

Molecule: Mitochondrial Atp Synthase Subunit Delta
Chain: R

Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502

Molecule: Atp Synthase Gamma Chain, Mitochondrial
Chain: S

Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502

Molecule: Atp Synthase Subunit Alpha
Chain: T, U, V

Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502

Molecule: Atp Synthase Subunit Beta
Chain: X, Y, Z
Ec: 7.1.2.2

Organism_scientific: Polytomella Sp. Pringsheim 198.80
Organism_taxid: 37502
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.10 Å
ligand ADP, ATP, MG, ZN enzyme E.C.7.1.2.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
09, 8


1


F, E, C, A, J, B, H, D, I, G


M


P


Q


R


S


T, V, U


Y, Z, X


Primary referenceRotary substates of mitochondrial ATP synthase reveal the basis of flexible F1-Fo coupling., Murphy BJ, Klusch N, Langer J, Mills DJ, Yildiz O, Kuhlbrandt W, Science. 2019 Jun 21;364(6446). pii: 364/6446/eaaw9128. doi:, 10.1126/science.aaw9128. Epub 2019 Jun 20. PMID:31221832
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (982 Kb) [Save to disk]
  • Biological Unit Coordinates (6rep.pdb1.gz) 955 Kb
  • LPC: Ligand-Protein Contacts for 6REP
  • CSU: Contacts of Structural Units for 6REP
  • Retrieve 6REP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6REP from S2C, [Save to disk]
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  • Visual 3D analysis of 6REP
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  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6rep_M] [6rep_6] [6rep_T] [6rep_4] [6rep_A] [6rep_5] [6rep_0] [6rep_U] [6rep_P] [6rep_Q] [6rep_1] [6rep_8] [6rep_3] [6rep_I] [6rep_9] [6rep_H] [6rep_B] [6rep_G] [6rep_7] [6rep_V] [6rep_R] [6rep_Z] [6rep_2] [6rep_D] [6rep_C] [6rep_J] [6rep_F] [6rep_Y] [6rep_S] [6rep_E] [6rep_X]
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  • Domain organization of by SWISSPFAM
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  • Community annotation for 6REP at PDBWiki (http://pdbwiki.org)

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