6RP8 Immune System date May 14, 2019
title Crystal Structure Of Ipilimumab Fab Complexed With Ctla-4 At Resolution
authors F.Zhang, A.Zhou
compound source
Molecule: Antibody Ipilimumab Heavy Chain
Chain: h, H
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293

Molecule: Antibody Ipilimumab Light Chain
Chain: l, L
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293

Molecule: Cytotoxic T-Lymphocyte Protein 4
Chain: C, c
Synonym: Cytotoxic T-Lymphocyte-Associated Antigen 4,Ctla-4
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ctla4, Cd152
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293
symmetry Space Group: P 1 21 1
R_factor 0.211 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.910 129.890 76.910 90.00 96.44 90.00
method X-Ray Diffractionresolution 2.60 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (344 Kb) [Save to disk]
  • Biological Unit Coordinates (6rp8.pdb1.gz) 171 Kb
  • Biological Unit Coordinates (6rp8.pdb2.gz) 173 Kb
  • CSU: Contacts of Structural Units for 6RP8
  • Structure Factors (835 Kb)
  • Retrieve 6RP8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6RP8 from S2C, [Save to disk]
    • View 6RP8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6RP8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6rp8_H] [6rp8_l] [6rp8_C] [6rp8_L] [6rp8_h] [6rp8_c]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6RP8
  • Community annotation for 6RP8 at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science