6RWO Recombination date Jun 05, 2019
title Sivrcm Intasome (Q148hg140s) In Complex With Bictegravir
authors P.Cherepanov, A.Nans, N.Cook
compound source
Molecule: Pol Protein
Chain: A, E, N, L, K, J, I, M, F, D, C, B
Engineered: Yes
Mutation: Yes
Other_details: Sivrcm Integrase
 Organism_scientific: Simian Immunodeficiency Virus
Organism_taxid: 11723
Variant: Siv Of Red-Capped Mangabeys
Gene: Pol
Expression_system: Escherichia Coli K-12
Expression_system_taxid: 83333
Expression_system_variant: Pc2

Molecule: Dna (5'- D(Apapcptpgpgptpapgpapgpaptptptptptpcptp C)-3');
Chain: Q, S
Engineered: Yes
Organism_scientific: Simian Immunodeficiency Virus
Organism_taxid: 11723
Variant: Siv Of Red-Capped Mangabeys
Gene: U5 Ltr End
Expression_system: Synthetic Construct
Expression_system_taxid: 32630

Molecule: Dna (5'- D(Pgpcptpapapgpapapapapaptpcptpcptpapcpc
Chain: W, T
Engineered: Yes
Organism_scientific: Simian Immunodeficiency Virus
Organism_taxid: 11723
Variant: Siv Of Red-Capped Mangabeys
Gene: U5 Ltr End
Expression_system: Synthetic Construct
Expression_system_taxid: 32630
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.05 Å
ligand CL, KLQ, MG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, N, K, E, B, M, C, D, I, L


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (343 Kb) [Save to disk]
  • Biological Unit Coordinates (6rwo.pdb1.gz) 326 Kb
  • LPC: Ligand-Protein Contacts for 6RWO
  • CSU: Contacts of Structural Units for 6RWO
  • Retrieve 6RWO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6RWO from S2C, [Save to disk]
    • View 6RWO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6RWO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6rwo_F] [6rwo_C] [6rwo_S] [6rwo_W] [6rwo_K] [6rwo_A] [6rwo_B] [6rwo_Q] [6rwo_I] [6rwo_N] [6rwo_J] [6rwo_L] [6rwo_T] [6rwo_D] [6rwo_M] [6rwo_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6RWO
  • Community annotation for 6RWO at PDBWiki (http://pdbwiki.org)

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