OCA Atlas for 6S0S

6S0S

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

AKG, CL, NI, RIO

enzyme

Gene
Ontology

Chain	Function	Process	Component
E, D, F, B, C, A

Primary reference

A study on the structure, mechanism and biochemistry of kanamycin B dioxygenase (KanJ) - an enzyme with a broad range of substrates., Mrugala B, Milaczewska A, Porebski PJ, Niedzialkowska E, Guzik M, Minor W, Borowski T, FEBS J. 2020 Jun 27. doi: 10.1111/febs.15462. PMID:32592631

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (566 Kb) [Save to disk]

Biological Unit Coordinates (6s0s.pdb1.gz) 98 Kb

Biological Unit Coordinates (6s0s.pdb2.gz) 98 Kb

Biological Unit Coordinates (6s0s.pdb3.gz) 96 Kb

Biological Unit Coordinates (6s0s.pdb4.gz) 97 Kb

Biological Unit Coordinates (6s0s.pdb5.gz) 97 Kb

Biological Unit Coordinates (6s0s.pdb6.gz) 96 Kb

LPC: Ligand-Protein Contacts for 6S0S

CSU: Contacts of Structural Units for 6S0S

Structure Factors (2009 Kb)

Retrieve 6S0S in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 6S0S from S2C, [Save to disk]

View 6S0S in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6s0s_A] [6s0s_B] [6s0s_C] [6s0s_D] [6s0s_E] [6s0s_F]

SWISS-PROT database:

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