6S1W Hydrolase date Jun 19, 2019
title Crystal Structure Of Dimeric M-Pmv Protease D26n Mutant
authors S.Wosicki, M.Gilski, M.Jaskolski, H.Zabranska, I.Pichova
compound source
Molecule: Gag-Pro-Pol Polyprotein
Chain: B, A
Synonym: Pr180
Ec: 3.6.1.23,3.4.23.-,2.7.7.49,2.7.7.7,3.1.26.4,2.7.7.-,3.1
Engineered: Yes
Mutation: Yes
Other_details: Gaps In The Sequence Indicate Residues That Modeled Because Of Poor Electron Density.
 Organism_scientific: Mason-Pfizer Monkey Virus
Organism_common: Mpmv
Organism_taxid: 11855
Gene: Gag-Pro-Pol
Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag
Expression_system_taxid: 866768
Expression_system_plasmid: Pbps13atg
symmetry Space Group: P 1 21 1
R_factor 0.200 R_Free 0.261
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.987 29.571 85.200 90.00 102.52 90.00
method X-Ray Diffractionresolution 1.98 Å
ligand
enzyme Hydrolase E.C.3.6.1.23 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (6s1w.pdb1.gz) 71 Kb
  • CSU: Contacts of Structural Units for 6S1W
  • Structure Factors (179 Kb)
  • Retrieve 6S1W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6S1W from S2C, [Save to disk]
    • View 6S1W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6S1W
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6s1w_A] [6s1w_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6S1W
  • Community annotation for 6S1W at PDBWiki (http://pdbwiki.org)

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