6S22 Transferase date Jun 20, 2019
title Crystal Structure Of The Tggalnac-T3 In Complex With Udp, Ma And Fgf23c
authors M.De Las Rivas, E.J.P.Daniel, Y.Narimatsu, I.Companon, K.Kato, P.Hermosilla, A.Thureau, L.Ceballos-Laita, H.Coelho, P.Bernado, F.Marcelo, L.Hansen, A.Lostao, F.Corzana, H.Clausen, T.A.Gerken, R.Hurtado-Guerrero
compound source
Molecule: Polypeptide N-Acetylgalactosaminyltransferase
Chain: A
Synonym: Protein-Udp Acetylgalactosaminyltransferase
Ec: 2.4.1.-
Engineered: Yes
Organism_scientific: Taeniopygia Guttata
Organism_common: Zebra Finch
Organism_taxid: 59729
Gene: Galnt3
Expression_system: Komagataella Pastoris
Expression_system_taxid: 4922

Molecule: Fibroblast Growth Factor 23
Chain: F
Synonym: Fgf-23,Phosphatonin,Tumor-Derived Hypophosphatemia Factor;
Engineered: Yes
Other_details: Note That This Is A Monoglycopeptide Derived
Fgf23: Ntpiprrhtrsa T Denotes T-O-Galnac

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor 0.179 R_Free 0.216
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.957 104.823 143.466 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.96 Å
ligand EDO, GOL, MN, NAG, NGA, SO4, UDP enzyme Transferase E.C.2.4.1 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk]
  • Biological Unit Coordinates (6s22.pdb1.gz) 96 Kb
  • LPC: Ligand-Protein Contacts for 6S22
  • CSU: Contacts of Structural Units for 6S22
  • Structure Factors (2300 Kb)
  • Retrieve 6S22 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6S22 from S2C, [Save to disk]
  • View 6S22 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6S22
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6s22_F] [6s22_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6S22
  • Community annotation for 6S22 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science