6S6A Signaling Protein date Jul 02, 2019
title Crystal Structure Of Raga-Q66lragc-T90n Gtpase Heterodimer
authors M.Anandapadamanaban, G.R.Masson, O.Perisic, J.Kaufman, R.L.Willi
compound source
Molecule: Ras-Related Gtp-Binding Protein A
Chain: A, B
Synonym: Raga,Adenovirus E3 14.7 Kda-Interacting Protein 1,
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rraga
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Ras-Related Gtp-Binding Protein C
Chain: C, D
Synonym: Ragc,Gtpase-Interacting Protein 2,Tib929
Engineered: Yes
Mutation: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rragc
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.195 R_Free 0.275
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.103 81.856 244.076 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.63 Å
ligand 9JE, GDP, GTP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


D, C


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (415 Kb) [Save to disk]
  • Biological Unit Coordinates (6s6a.pdb1.gz) 201 Kb
  • Biological Unit Coordinates (6s6a.pdb2.gz) 206 Kb
  • LPC: Ligand-Protein Contacts for 6S6A
  • CSU: Contacts of Structural Units for 6S6A
  • Structure Factors (1710 Kb)
  • Retrieve 6S6A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6S6A from S2C, [Save to disk]
  • View 6S6A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6S6A
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6s6a_C] [6s6a_D] [6s6a_A] [6s6a_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6S6A
  • Community annotation for 6S6A at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science