6SF3 Cytokine date Jul 31, 2019
title Bone Morphogenetic Protein 10 (Bmp10) In Complex With Extrac Domain Of Activin Receptor-Like Kinase 1 (Alk1) At 2.3 Angs
authors J.Guo, M.Yu, W.Li
compound source
Molecule: Serinethreonine-Protein Kinase Receptor R3
Chain: A
Synonym: Skr3,Activin Receptor-Like Kinase 1,Alk-1,Tgf-B Su Receptor Type I,Tsr-I;
Ec: 2.7.11.30
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Acvrl1, Acvrlk1, Alk1
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Bone Morphogenetic Protein 10
Chain: B
Synonym: Bmp-10
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bmp10
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek-Ebna
symmetry Space Group: P 65 2 2
R_factor 0.214 R_Free 0.243
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.269 58.269 311.435 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.30 Å
ligand
enzyme Transferase E.C.2.7.11.30 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (6sf3.pdb1.gz) 123 Kb
  • CSU: Contacts of Structural Units for 6SF3
  • Structure Factors (388 Kb)
  • Retrieve 6SF3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6SF3 from S2C, [Save to disk]
    • View 6SF3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6SF3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6sf3_B] [6sf3_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6SF3
  • Community annotation for 6SF3 at PDBWiki (http://pdbwiki.org)

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