6SGW Membrane Protein date Aug 05, 2019
title Structure Of The Esx-3 Core Complex
authors N.Famelis, A.Rivera-Calzada, O.Llorca, S.Geibel
compound source
Molecule: Esx-3 Secretion System Atpase Eccb3
Chain: A, I
Synonym: Esx Conserved Component B3,Type Vii Secretion Syst Eccb3,T7ss Protein Eccb3;
Ec: 3.6.-.-
Engineered: Yes
Organism_scientific: Mycobacterium Smegmatis (Strain Atcc 7 Mc(2)155);
Organism_taxid: 246196
Strain: Atcc 700084 Mc(2)155
Gene: Eccb3, Msmeg_0616, Msmei_0600
Expression_system: Mycolicibacterium Smegmatis Mc2 155
Expression_system_taxid: 246196

Molecule: Esx-3 Secretion System Protein Eccd3
Chain: B, C, E, H
Synonym: Esx Conserved Component D3,Type Vii Secretion Syst Eccd3,T7ss Protein Eccd3;
Engineered: Yes

Organism_scientific: Mycobacterium Smegmatis (Strain Atcc 7 Mc(2)155);
Organism_taxid: 246196
Strain: Atcc 700084 Mc(2)155
Gene: Eccd3, Snm, Msmeg_0623, Msmei_0607
Expression_system: Mycolicibacterium Smegmatis Mc2 155
Expression_system_taxid: 246196

Molecule: Esx-3 Secretion System Protein Eccc3
Chain: F, J
Synonym: Esx Conserved Component C3,Type Vii Secretion Syst Eccc3,T7ss Protein Eccc3;
Engineered: Yes

Organism_scientific: Mycobacterium Smegmatis (Strain Atcc 7 Mc(2)155);
Organism_taxid: 246196
Strain: Atcc 700084 Mc(2)155
Gene: Eccc3, Msmeg_0617, Msmei_0601
Expression_system: Mycolicibacterium Smegmatis Mc2 155
Expression_system_taxid: 246196

Molecule: Esx-3 Secretion System Protein Ecce3
Chain: G, D
Synonym: Esx Conserved Component E3,Type Vii Secretion Syst Ecce3,T7ss Protein Ecce3;
Engineered: Yes

Organism_scientific: Mycobacterium Smegmatis (Strain Atcc 7 Mc(2)155);
Organism_taxid: 246196
Strain: Atcc 700084 Mc(2)155
Gene: Ecce3, Msmeg_0626, Msmei_0609
Expression_system: Mycolicibacterium Smegmatis Mc2 155
Expression_system_taxid: 246196
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.80 Å
ligand
enzyme Hydrolase E.C.3.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
H, D, C, G, E, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (409 Kb) [Save to disk]
  • Biological Unit Coordinates (6sgw.pdb1.gz) 404 Kb
  • CSU: Contacts of Structural Units for 6SGW
  • Retrieve 6SGW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6SGW from S2C, [Save to disk]
  • View 6SGW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6SGW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6sgw_J] [6sgw_E] [6sgw_D] [6sgw_H] [6sgw_G] [6sgw_B] [6sgw_A] [6sgw_C] [6sgw_I] [6sgw_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6SGW
  • Community annotation for 6SGW at PDBWiki (http://pdbwiki.org)

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