6SJ7	Oncoprotein	date	Aug 12, 2019
title	Structure Of The Human Ddb1-Dda1-Dcaf15 E3 Ubiquitin Ligase Rbm39 And Indisulam
authors	H.Srinivas
compound		source
Molecule: Ddb1- And Cul4-Associated Factor 15 Chain: A Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dcaf15, C19orf72 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_cell_line: Sf21 Expression_system_vector: Baculovirus
Molecule: Dna Damage-Binding Protein 1 Chain: B Synonym: Ddb P127 Subunit,Dna Damage-Binding Protein A,Ddba Specific Dna-Binding Protein 1,Hbv X-Associated Protein 1,X Damaged Dna-Binding Factor,Uv-Damaged Dna-Binding Protein 1 Xpe-Binding Factor,Xpe-Bf,Xeroderma Pigmentosum Group E-Com Protein,Xpce; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ddb1, Xap1 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_cell_line: Sf21
Molecule: Rna Binding Protein 39 Chain: C Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dkfzp781i1140 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_vector: Baculovirus
Molecule: Det1- And Ddb1-Associated Protein 1 Chain: D Synonym: Placenta Cross-Immune Reaction Antigen 1,Pcia-1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dda1, C19orf58, Pcia1 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_cell_line: Sf21 Expression_system_vector: Baculovirus
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	3.54 Å
ligand	EF6	enzyme
Gene Ontology	Chain Function Process Component A B C D

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (193 Kb) [Save to disk] Biological Unit Coordinates (6sj7.pdb1.gz) 185 Kb LPC: Ligand-Protein Contacts for 6SJ7 CSU: Contacts of Structural Units for 6SJ7 Retrieve 6SJ7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6SJ7 from S2C, [Save to disk]

View 6SJ7 in 3D

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Visual 3D analysis of 6SJ7

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6sj7_C] [6sj7_D] [6sj7_A] [6sj7_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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