6SV6 Hydrolase date Sep 17, 2019
title Non-Terahertz Irradiated Structure Of Bovine Trypsin (Even F Crystal X38)
authors V.Ahlberg Gagner, I.Lundholm, M.J.Garcia-Bonete, H.Rodilla, R.Fr V.Zhaunerchyk, G.Bourenkov, T.Schneider, J.Stake, G.Katona
compound source
Molecule: Cationic Trypsin
Chain: A
Synonym: Beta-Trypsin
Ec: 3.4.21.4
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
symmetry Space Group: P 21 21 21
R_factor 0.131 R_Free 0.166
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.440 56.770 65.430 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.15 Å
ligand BEN, CA, SO4 enzyme Hydrolase E.C.3.4.21.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (6sv6.pdb1.gz) 84 Kb
  • LPC: Ligand-Protein Contacts for 6SV6
  • CSU: Contacts of Structural Units for 6SV6
  • Structure Factors (1826 Kb)
  • Retrieve 6SV6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6SV6 from S2C, [Save to disk]
  • View 6SV6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6SV6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6sv6_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6SV6
  • Community annotation for 6SV6 at PDBWiki (http://pdbwiki.org)

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