6TCE Transcription date Nov 05, 2019
title Crystal Structure Of The Ggct Site-Bound Mh1 Domain Of Smad5 Containing A Gggs Insertion In The Loop1
authors R.Pluta, M.J.Macias
compound source
Molecule: Mothers Against Decapentaplegic Homolog 5
Chain: A
Synonym: Mothers Against Dpp Homolog 5,Jv5-1,Smad Family Me Hsmad5;
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Smad5, Madh5
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Dna (5'- D(Ptpgpcpapgpgpcptpapgpcpcptpgpcpa)-3');
Chain: B
Engineered: Yes
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: I 41 2 2
R_factor 0.208 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.123 106.123 82.395 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.92 Å
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk]
  • Biological Unit Coordinates (6tce.pdb1.gz) 113 Kb
  • LPC: Ligand-Protein Contacts for 6TCE
  • CSU: Contacts of Structural Units for 6TCE
  • Structure Factors (509 Kb)
  • Retrieve 6TCE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6TCE from S2C, [Save to disk]
    • View 6TCE in 3D
  • Proteopedia, because life has more than 2D.
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    • Visual 3D analysis of 6TCE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6tce_B] [6tce_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6TCE
  • Community annotation for 6TCE at PDBWiki (http://pdbwiki.org)

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