6TD5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BO2, N2E enzyme
Primary referenceDiscovery and Characterization of Clinical Candidate LXE408 as a Kinetoplastid-Selective Proteasome Inhibitor for the Treatment of Leishmaniases., Nagle A, Biggart A, Be C, Srinivas H, Hein A, Caridha D, Sciotti RJ, Pybus B, Kreishman-Deitrick M, Bursulaya B, Lai YH, Gao MY, Liang F, Mathison CJN, Liu X, Yeh V, Smith J, Lerario I, Xie Y, Chianelli D, Gibney M, Berman A, Chen YL, Jiricek J, Davis LC, Liu X, Ballard J, Khare S, Eggimann FK, Luneau A, Groessl T, Shapiro M, Richmond W, Johnson K, Rudewicz PJ, Rao SPS, Thompson C, Tuntland T, Spraggon G, Glynne RJ, Supek F, Wiesmann C, Molteni V, J Med Chem. 2020 Oct 8;63(19):10773-10781. doi: 10.1021/acs.jmedchem.0c00499., Epub 2020 Jul 29. PMID:32667203
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (893 Kb) [Save to disk]
  • Biological Unit Coordinates (6td5.pdb1.gz) 883 Kb
  • LPC: Ligand-Protein Contacts for 6TD5
  • CSU: Contacts of Structural Units for 6TD5
  • Retrieve 6TD5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6TD5 from S2C, [Save to disk]
    • View 6TD5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6td5_A] [6td5_B] [6td5_C] [6td5_D] [6td5_E] [6td5_F] [6td5_G] [6td5_H] [6td5_I] [6td5_J] [6td5_K] [6td5_L] [6td5_M] [6td5_N] [6td5_a] [6td5_b] [6td5_c] [6td5_d] [6td5_e] [6td5_f] [6td5_g] [6td5_h] [6td5_i] [6td5_j] [6td5_k] [6td5_l] [6td5_m] [6td5_n]
  • SWISS-PROT database:

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