6TMS date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SO4 enzyme
Primary referenceComputational design of transmembrane pores., Xu C, Lu P, Gamal El-Din TM, Pei XY, Johnson MC, Uyeda A, Bick MJ, Xu Q, Jiang D, Bai H, Reggiano G, Hsia Y, Brunette TJ, Dou J, Ma D, Lynch EM, Boyken SE, Huang PS, Stewart L, DiMaio F, Kollman JM, Luisi BF, Matsuura T, Catterall WA, Baker D, Nature. 2020 Sep;585(7823):129-134. doi: 10.1038/s41586-020-2646-5. Epub 2020 Aug, 26. PMID:32848250
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (160 Kb) [Save to disk]
  • Biological Unit Coordinates (6tms.pdb1.gz) 78 Kb
  • Biological Unit Coordinates (6tms.pdb2.gz) 77 Kb
  • LPC: Ligand-Protein Contacts for 6TMS
  • CSU: Contacts of Structural Units for 6TMS
  • Structure Factors (655 Kb)
  • Retrieve 6TMS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6TMS from S2C, [Save to disk]
    • View 6TMS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6tms_A] [6tms_B] [6tms_C] [6tms_D] [6tms_E] [6tms_F] [6tms_G] [6tms_H] [6tms_I] [6tms_J] [6tms_K] [6tms_L] [6tms_Q] [6tms_R]
  • SWISS-PROT database:

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