6TOP		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component B, A, C, D
Primary reference	Crystal structure of Type IX secretion system PorE C-terminal domain from Porphyromonas gingivalis in complex with a peptidoglycan fragment., Trinh NTT, Tran HQ, Van Dong Q, Cambillau C, Roussel A, Leone P, Sci Rep. 2020 Apr 30;10(1):7384. doi: 10.1038/s41598-020-64115-z. PMID:32355178

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (218 Kb) [Save to disk] Biological Unit Coordinates (6top.pdb1.gz) 56 Kb Biological Unit Coordinates (6top.pdb2.gz) 54 Kb Biological Unit Coordinates (6top.pdb3.gz) 54 Kb Biological Unit Coordinates (6top.pdb4.gz) 55 Kb CSU: Contacts of Structural Units for 6TOP Structure Factors (3253 Kb) Retrieve 6TOP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6TOP from S2C, [Save to disk]

View 6TOP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6top_A] [6top_B] [6top_C] [6top_D] SWISS-PROT database:

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