6TSZ Signaling Protein date Dec 22, 2019
title The Ulk4 Pseudokinase Domain Bound To Atpgammas
authors F.Preuss, D.Chatterjee, S.Mathea, C.H.Arrowsmith, C.Bountra, A.M. S.Knapp
compound source
Molecule: Serinethreonine-Protein Kinase Ulk4
Chain: U
Synonym: Unc-51-Like Kinase 4
Ec: 2.7.11.1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ulk4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.201 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.442 41.468 69.755 90.00 113.06 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand AGS enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
U


Primary referenceNucleotide Binding, Evolutionary Insights, and Interaction Partners of the Pseudokinase Unc-51-like Kinase 4., Preuss F, Chatterjee D, Mathea S, Shrestha S, St-Germain J, Saha M, Kannan N, Raught B, Rottapel R, Knapp S, Structure. 2020 Aug 13. pii: S0969-2126(20)30280-X. doi:, 10.1016/j.str.2020.07.016. PMID:32814032
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (6tsz.pdb1.gz) 94 Kb
  • LPC: Ligand-Protein Contacts for 6TSZ
  • CSU: Contacts of Structural Units for 6TSZ
  • Structure Factors (613 Kb)
  • Retrieve 6TSZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6TSZ from S2C, [Save to disk]
    • View 6TSZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6TSZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6tsz_U]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6TSZ
  • Community annotation for 6TSZ at PDBWiki (http://pdbwiki.org)

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