6TU6 De Novo Protein date Jan 02, 2020
title Kemp Eliminase Hg3.17 Mutant Q50m, E47n, N300d Complexed Wit Transition State Analog 6-Nitrobenzotriazole
authors J.S.Bloch, D.Hilvert
compound source
Molecule: Kemp Eliminase Hg3.17 Mutant Q50m, E47n, N300d Co With Transition State Analog 6-Nitrobenzotriazole;
Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P
Engineered: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag
Expression_system_taxid: 866768
symmetry Space Group: P 1
R_factor 0.196 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
98.370 108.690 108.720 88.53 90.16 89.82
method X-Ray Diffractionresolution 1.05 Å
ligand 6NT, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, N, K, E, M, C, L, A, J, O, P, B, H, D, I, G


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2509 Kb) [Save to disk]
  • Biological Unit Coordinates (6tu6.pdb1.gz) 162 Kb
  • Biological Unit Coordinates (6tu6.pdb2.gz) 163 Kb
  • Biological Unit Coordinates (6tu6.pdb3.gz) 162 Kb
  • Biological Unit Coordinates (6tu6.pdb4.gz) 160 Kb
  • Biological Unit Coordinates (6tu6.pdb5.gz) 161 Kb
  • Biological Unit Coordinates (6tu6.pdb6.gz) 159 Kb
  • Biological Unit Coordinates (6tu6.pdb7.gz) 158 Kb
  • Biological Unit Coordinates (6tu6.pdb8.gz) 161 Kb
  • Biological Unit Coordinates (6tu6.pdb9.gz) 160 Kb
  • LPC: Ligand-Protein Contacts for 6TU6
  • CSU: Contacts of Structural Units for 6TU6
  • Structure Factors (56328 Kb)
  • Retrieve 6TU6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6TU6 from S2C, [Save to disk]
  • View 6TU6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6TU6
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6tu6 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6tu6_P] [6tu6_C] [6tu6_G] [6tu6_J] [6tu6_D] [6tu6_O] [6tu6_B] [6tu6_E] [6tu6_M] [6tu6_N] [6tu6_L] [6tu6_A] [6tu6_K] [6tu6_I] [6tu6_H] [6tu6_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6TU6
  • Community annotation for 6TU6 at PDBWiki (http://pdbwiki.org)

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