6TXZ Immune System date Jan 15, 2020
title Fab Part Of M6903 In Complex With Human Tim3
authors D.Musil, V.Sood
compound source
Molecule: Hepatitis A Virus Cellular Receptor 2
Chain: A, B, C, D
Fragment: Fab Antibody Fragment
Synonym: Havcr-2,T-Cell Immunoglobulin And Mucin Domain-Con Protein 3,Timd-3,T-Cell Immunoglobulin Mucin Receptor 3,Tim Membrane Protein 3;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Havcr2, Tim3, Timd3
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Fab H
Chain: H, I, J, K
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606

Molecule: Fab L
Chain: L, M, N, O
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
symmetry Space Group: C 2 2 21
R_factor 0.197 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
119.350 270.115 197.889 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.06 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (677 Kb) [Save to disk]
  • Biological Unit Coordinates (6txz.pdb1.gz) 171 Kb
  • Biological Unit Coordinates (6txz.pdb2.gz) 173 Kb
  • Biological Unit Coordinates (6txz.pdb3.gz) 172 Kb
  • Biological Unit Coordinates (6txz.pdb4.gz) 172 Kb
  • CSU: Contacts of Structural Units for 6TXZ
  • Structure Factors (613 Kb)
  • Retrieve 6TXZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6TXZ from S2C, [Save to disk]
    • View 6TXZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6TXZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6txz_K] [6txz_O] [6txz_H] [6txz_N] [6txz_A] [6txz_J] [6txz_C] [6txz_B] [6txz_M] [6txz_L] [6txz_I] [6txz_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6TXZ
  • Community annotation for 6TXZ at PDBWiki (http://pdbwiki.org)

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