6U66 Hormone date Aug 29, 2019
title Structure Of The Trimeric Globular Domain Of Adiponectin
authors R.Pascolutti, A.C.Kruse, S.C.Erlandson, D.J.Burri, S.Zheng
compound source
Molecule: Adiponectin
Chain: A, B, C
Synonym: 30 Kda Adipocyte Complement-Related Protein,Adipoc Complement-Related 30 Kda Protein,Acrp30,Adipocyte,C1q And Domain-Containing Protein,Adipose Most Abundant Gene Transc Protein,Apm-1,Gelatin-Binding Protein;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Adipoq, Acdc, Acrp30, Apm1, Gbp28
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmal
symmetry Space Group: P 1
R_factor 0.165 R_Free 0.190
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.923 49.635 50.306 116.83 100.89 104.92
method X-Ray Diffractionresolution 0.99 Å
ligand CA, NA enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (230 Kb) [Save to disk]
  • Biological Unit Coordinates (6u66.pdb1.gz) 223 Kb
  • LPC: Ligand-Protein Contacts for 6U66
  • CSU: Contacts of Structural Units for 6U66
  • Structure Factors (11629 Kb)
  • Retrieve 6U66 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6U66 from S2C, [Save to disk]
    • View 6U66 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6U66
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6u66_A] [6u66_C] [6u66_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6U66
  • Community annotation for 6U66 at PDBWiki (http://pdbwiki.org)

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