6U81 Crystal Structure of the Double Homeodomain of DUX4 in Complex with a DNA aptamer date
authors Shi, K., Aihara, H.
compound source
symmetry
R_factor
R_Free 0.2470
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.34
ligand EDO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (6u81.pdb1.gz) 135 Kb
  • LPC: Ligand-Protein Contacts for 6U81
  • CSU: Contacts of Structural Units for 6U81
  • Structure Factors (106 Kb)
  • Retrieve 6U81 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6U81 from S2C, [Save to disk]
  • View 6U81 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6U81
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6u81 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6u81_C] [6u81_A] [6u81_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6U81
  • Community annotation for 6U81 at PDBWiki (http://pdbwiki.org)

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