6UAZ Hydrolase date Sep 11, 2019
title Crystal Structure Of A Gh128 (Subgroup III) Curdlan-Specific 1,3-Glucanase From Blastomyces Gilchristii (Bggh128_iii) In With Glucose
authors P.A.C.R.Costa, C.R.Santos, M.N.Domingues, E.A.Lima, F.Mandelli, M.T.Murakami
compound source
Molecule: Glyco_hydro_cc Domain-Containing Protein
Chain: A, B
Engineered: Yes
 Organism_scientific: Blastomyces Gilchristii
Organism_taxid: 1681229
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor 0.164 R_Free 0.217
crystal
cell
length a length b length c angle alpha angle beta angle gamma
36.460 48.928 57.757 102.97 89.34 93.76
method X-Ray Diffractionresolution 1.85 Å
ligand BGC enzyme
Primary referenceStructural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family., Santos CR, Costa PACR, Vieira PS, Gonzalez SET, Correa TLR, Lima EA, Mandelli F, Pirolla RAS, Domingues MN, Cabral L, Martins MP, Cordeiro RL, Junior AT, Souza BP, Prates ET, Gozzo FC, Persinoti GF, Skaf MS, Murakami MT, Nat Chem Biol. 2020 May 25. pii: 10.1038/s41589-020-0554-5. doi:, 10.1038/s41589-020-0554-5. PMID:32451508
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk]
  • Biological Unit Coordinates (6uaz.pdb1.gz) 40 Kb
  • Biological Unit Coordinates (6uaz.pdb2.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 6UAZ
  • CSU: Contacts of Structural Units for 6UAZ
  • Structure Factors (201 Kb)
  • Retrieve 6UAZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6UAZ from S2C, [Save to disk]
    • View 6UAZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6UAZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6uaz_B] [6uaz_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6UAZ
  • Community annotation for 6UAZ at PDBWiki (http://pdbwiki.org)

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