6UEA Immune System date Sep 20, 2019
title Structure Of Pentameric Siga Complex
authors N.Kumar, C.P.Arthur, C.Ciferri, M.L.Matsumoto
compound source
Molecule: Immunoglobulin Heavy Constant Alpha 2
Chain: A, B, F, G, K, L, E, H, I, J
Fragment: Unp Residues 110-340
Synonym: Ig Alpha-2 Chain C Region,Ig Alpha-2 Chain C Regio Alpha-2 Chain C Region Lan;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Igha2
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029

Molecule: Polymeric Immunoglobulin Receptor
Chain: C
Fragment: Unp Residues 19-603
Synonym: Poly-Ig Receptor,Hepatocellular Carcinoma-Associat Tb6;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pigr
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029

Molecule: Immunoglobulin J Chain
Chain: D
Fragment: Unp Residues 23-159
Synonym: Joining Chain Of Multimeric Iga And Igm
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Jchain, Igcj, Igj
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.00 Å
ligand BMA, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
D


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (392 Kb) [Save to disk]
  • Biological Unit Coordinates (6uea.pdb1.gz) 383 Kb
  • LPC: Ligand-Protein Contacts for 6UEA
  • CSU: Contacts of Structural Units for 6UEA
  • Retrieve 6UEA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6UEA from S2C, [Save to disk]
  • View 6UEA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6UEA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6uea_C] [6uea_D] [6uea_H] [6uea_A] [6uea_J] [6uea_E] [6uea_K] [6uea_I] [6uea_G] [6uea_F] [6uea_L] [6uea_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6UEA
  • Community annotation for 6UEA at PDBWiki (http://pdbwiki.org)

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