6UPV Cell Adhesion date Oct 18, 2019
title Alpha-E-Catenin Abd-F-Actin Complex
authors L.Mei, G.M.Alushin
compound source
Molecule: Catenin Alpha-1
Chain: M, L
Synonym: Alpha E-Catenin,Cadherin-Associated Protein,Renal Antigen Ny-Ren-13;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ctnna1
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Actin, Alpha Skeletal Muscle
Chain: A, B, C, D, E
Synonym: Alpha-Actin-1
Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.20 Å
ligand ADP, HIC, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, E, B


M, L


Primary referenceMolecular mechanism for direct actin force-sensing by alpha-catenin., Mei L, Espinosa de Los Reyes S, Reynolds MJ, Leicher R, Liu S, Alushin GM, Elife. 2020 Sep 24;9. pii: 62514. doi: 10.7554/eLife.62514. PMID:32969337
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (325 Kb) [Save to disk]
  • Biological Unit Coordinates (6upv.pdb1.gz) 308 Kb
  • LPC: Ligand-Protein Contacts for 6UPV
  • CSU: Contacts of Structural Units for 6UPV
  • Retrieve 6UPV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6UPV from S2C, [Save to disk]
    • View 6UPV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6UPV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6upv_C] [6upv_L] [6upv_M] [6upv_D] [6upv_A] [6upv_B] [6upv_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6UPV
  • Community annotation for 6UPV at PDBWiki (http://pdbwiki.org)

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