6USJ | Dna Binding Protein Dna | date | Oct 27, 2019 |
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title | Structure Of Two Nucleosomes Bridged By Human Parp2 | ||||||||||||||
authors | G.Gaullier, S.Bowerman, K.Luger | ||||||||||||||
compound | source | ||||||||||||||
Molecule: Widom 601 Dna (160-Mer) Chain: I, S Engineered: Yes Other_details: Widom 601 Nucleosome Positioning Sequence Wi 11 Additional Terminal Base Pairs; |
Organism_scientific: Synthetic Construct Organism_taxid: 32630 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||
Molecule: Widom 601 Dna (160-Mer) Chain: J, T Engineered: Yes |
Organism_scientific: Synthetic Construct Organism_taxid: 32630 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||
Molecule: Histone H3.1 Chain: A, E, K, O Synonym: Histone H3a,Histone H3b,Histone H3c,Histone H3 H3f,Histone H3h,Histone H3i,Histone H3j,Histone H3k,Hi H3l; Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: H3c1, H3fa, Hist1h3a, H3c2, H3fl, Hist1h3b, H3c3, H3f Hist1h3c, H3c4, H3fb, Hist1h3d, H3c6, H3fd, Hist1h3e, H3c7, Hist1h3f, H3c8, H3fh, Hist1h3g, H3c10, H3fk, Hist1h3h, H3c1 Hist1h3i, H3c12, H3fj, Hist1h3j; Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||
Molecule: Histone H4 Chain: B, F, L, P Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: H4c1, H4a, H4fa, Hist1h4a, H4c2, H4i, H4fi, Hist1h4 H4g, H4fg, Hist1h4c, H4c4, H4b, H4fb, Hist1h4d, H4c5, H4 Hist1h4e, H4c6, H4c, H4fc, Hist1h4f, H4c8, H4h, H4fh, His H4c9, H4m, H4fm, Hist1h4i, H4c11, H4e, H4fe, Hist1h4j, H4 H4d, H4fd, Hist1h4k, H4c13, H4k, H4fk, Hist1h4l, H4c14, H H4f2, H4fn, Hist2h4, Hist2h4a, H4c15, H4o, H4fo, Hist2h4b, Hist4h4; Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||
Molecule: Histone H2a Chain: C, G, M, Q Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hist1h2ab, Hist1h2ae, Hcg_1640984, Hcg_1787383 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||
Molecule: Histone H2b Type 1-J Chain: D, H, N, R Synonym: Histone H2b.1,Histone H2b.R,H2br Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hist1h2bj, H2bfr Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||
Molecule: Poly [Adp-Ribose] Polymerase 2 Chain: U, V Synonym: Hparp-2,Adp-Ribosyltransferase Diphtheria Toxin-Li Artd2,Dna Adp-Ribosyltransferase Parp2,Nad(+) Adp-Ribosyltr 2,Adprt-2,Poly[Adp-Ribose] Synthase 2,Padprt-2,Protein Poly Ribosyltransferase Parp2; Ec: 2.4.2.30,2.4.2.- Engineered: Yes Mutation: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Variant: Isoform 2 Gene: Parp2, Adprt2, Adprtl2 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||
symmetry | Space Group: P 1 |
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crystal cell |
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method | Electron Microscopy | resolution | 10.50 Å | ||||||||||||
ligand | enzyme | Transferase E.C.2.4.2.30 BRENDA | |||||||||||||
Primary reference | Bridging of nucleosome-proximal DNA double-strand breaks by PARP2 enhances its interaction with HPF1., Gaullier G, Roberts G, Muthurajan UM, Bowerman S, Rudolph J, Mahadevan J, Jha A, Rae PS, Luger K, PLoS One. 2020 Nov 3;15(11):e0240932. doi: 10.1371/journal.pone.0240932., eCollection 2020. PMID:33141820 |
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