6V0O Transferase Splicing date Nov 19, 2019
title Prmt5 Bound To The Pbm Peptide From Picln
authors B.J.Mcmillan, D.D.Raymond
compound source
Molecule: Protein Arginine N-Methyltransferase 5
Chain: A
Synonym: 72 Kda Icln-Binding Protein,Histone-Arginine N- Methyltransferase Prmt5,Jak-Binding Protein 1,Shk1 Kinase-B Protein 1 Homolog,Skb1hs;
Ec: 2.1.1.320
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Prmt5, Hrmt1l5, Ibp72, Jbp1, Skb1
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Methylosome Protein 50
Chain: B
Synonym: Mep-50,Androgen Receptor Cofactor P44,Wd Repeat-Co Protein 77,P44mep50;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Wdr77, Mep50, Wd45, Hkmt1069, Nbla10071
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Pbm Peptide
Chain: D
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
symmetry Space Group: I 2 2 2
R_factor 0.211 R_Free 0.247
crystal
cell
length a length b length c angle alpha angle beta angle gamma
100.010 136.400 179.770 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.86 Å
ligand ACE, SFG enzyme Transferase E.C.2.1.1.320 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • transcription corepressor ac...
  • protein-arginine omega-N sym...


  • B
  • ligand-dependent nuclear rec...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (157 Kb) [Save to disk]
  • Biological Unit Coordinates (6v0o.pdb1.gz) 587 Kb
  • Biological Unit Coordinates (6v0o.pdb2.gz) 593 Kb
  • LPC: Ligand-Protein Contacts for 6V0O
  • CSU: Contacts of Structural Units for 6V0O
  • Structure Factors (944 Kb)
  • Retrieve 6V0O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6V0O from S2C, [Save to disk]
  • View 6V0O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6V0O
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6v0o_A] [6v0o_D] [6v0o_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6V0O
  • Community annotation for 6V0O at PDBWiki (http://pdbwiki.org)

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