6V0Q Gene Regulation date Nov 19, 2019
title Crystal Structure Of The Bromodomain Of Human Brd7 Bound To
authors M.R.Karim, A.Chan, E.Schonbrunn
compound source
Molecule: Bromodomain-Containing Protein 7
Chain: A, B, C, D
Synonym: 75 Kda Bromodomain Protein,Protein Celtix-1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Brd7, Bp75, Celtix1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: Ripl
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 1 21 1
R_factor 0.181 R_Free 0.218
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.970 36.780 118.960 90.00 101.77 90.00
method X-Ray Diffractionresolution 1.69 Å
ligand CL, EAE, EDO, GOL, PO4 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (175 Kb) [Save to disk]
  • Biological Unit Coordinates (6v0q.pdb1.gz) 45 Kb
  • Biological Unit Coordinates (6v0q.pdb2.gz) 44 Kb
  • Biological Unit Coordinates (6v0q.pdb3.gz) 44 Kb
  • Biological Unit Coordinates (6v0q.pdb4.gz) 44 Kb
  • Biological Unit Coordinates (6v0q.pdb5.gz) 87 Kb
  • Biological Unit Coordinates (6v0q.pdb6.gz) 86 Kb
  • LPC: Ligand-Protein Contacts for 6V0Q
  • CSU: Contacts of Structural Units for 6V0Q
  • Structure Factors (439 Kb)
  • Retrieve 6V0Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6V0Q from S2C, [Save to disk]
    • View 6V0Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6V0Q
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6v0q_B] [6v0q_A] [6v0q_C] [6v0q_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6V0Q
  • Community annotation for 6V0Q at PDBWiki (http://pdbwiki.org)

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