6V21 Metal Binding Protein, Oxidoreductase date Nov 21, 2019
title Mouse Heavy Chain Apoferritin Determined Using Single-Partic At 200 Kev
authors M.Wu, G.C.Lander, M.A.Herzik
compound source
Molecule: Ferritin Heavy Chain
Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R V, W, X;
Synonym: Ferritin H Subunit
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Fth1, Fth
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 1.75 Å
enzyme Oxidoreductase E.C. BRENDA
S, F, T, N, K, E, V, Q, M, C, L, A, J, O, W, X, P, B, H, D, R, I, G, U

Primary referenceSub-2 Angstrom resolution structure determination using single-particle cryo-EM at 200keV., Wu M, Lander GC, Herzik MA Jr, J Struct Biol X. 2020 Feb 28;4:100020. doi: 10.1016/j.yjsbx.2020.100020., eCollection 2020. PMID:32647824
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (6011 Kb) [Save to disk]
  • Biological Unit Coordinates (6v21.pdb1.gz) 605 Kb
  • CSU: Contacts of Structural Units for 6V21
  • Retrieve 6V21 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6V21 from S2C, [Save to disk]
  • View 6V21 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6V21
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6v21_O] [6v21_I] [6v21_E] [6v21_K] [6v21_Q] [6v21_A] [6v21_C] [6v21_X] [6v21_M] [6v21_D] [6v21_F] [6v21_P] [6v21_U] [6v21_S] [6v21_T] [6v21_L] [6v21_N] [6v21_V] [6v21_J] [6v21_H] [6v21_B] [6v21_G] [6v21_W] [6v21_R]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6V21
  • Community annotation for 6V21 at PDBWiki (http://pdbwiki.org)

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