6V3O Lyase date Nov 26, 2019
title Crystal Structure Of The T-State Of Maize C4-Phosphoenolpyru Carboxylase In Complex With Citrate
authors E.I.Carrizosa-Carbajal, R.A.Munoz-Clares, L.Gonzalez-Segura
compound source
Molecule: Phosphoenolpyruvate Carboxylase
Chain: A, B, C, D, E, F, G, H
Ec: 4.1.1.31
Engineered: Yes
Organism_scientific: Zea Mays
Organism_common: Maize
Organism_taxid: 4577
Gene: Ppc1
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_variant: Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet32-Zmpepc-C4
symmetry Space Group: P 1 21 1
R_factor 0.218 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
140.692 217.976 173.569 90.00 91.05 90.00
method X-Ray Diffractionresolution 2.91 Å
ligand FLC, GOL, PG0, SO4 enzyme Lyase E.C.4.1.1.31 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1203 Kb) [Save to disk]
  • Biological Unit Coordinates (6v3o.pdb1.gz) 591 Kb
  • Biological Unit Coordinates (6v3o.pdb2.gz) 592 Kb
  • LPC: Ligand-Protein Contacts for 6V3O
  • CSU: Contacts of Structural Units for 6V3O
  • Structure Factors (5178 Kb)
  • Retrieve 6V3O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6V3O from S2C, [Save to disk]
  • View 6V3O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6V3O
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6v3o from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6v3o_C] [6v3o_F] [6v3o_G] [6v3o_D] [6v3o_H] [6v3o_B] [6v3o_E] [6v3o_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6V3O
  • Community annotation for 6V3O at PDBWiki (http://pdbwiki.org)

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