6V5D Signaling Protein date Dec 04, 2019
title Eros3 Rdc And Noe Derived Ubiquitin Ensemble
authors O.F.Lange, N.A.Lakomek, C.A.Smith, C.Griesinger, B.L.De Groot
compound source
Molecule: Ubiquitin
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ubc
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (3651 Kb) [Save to disk]
  • Biological Unit Coordinates (6v5d.pdb1.gz) 22 Kb
  • CSU: Contacts of Structural Units for 6V5D
  • Original NMR restraints for 6V5D from PDB
  • Retrieve 6V5D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6V5D from S2C, [Save to disk]
  • View 6V5D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6V5D
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6v5d from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6v5d_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6V5D
  • Community annotation for 6V5D at PDBWiki (http://pdbwiki.org)

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