6VMY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand B1Z, GTP, MG, NCO enzyme
Primary referenceCrystal structure of an atypical cobalamin riboswitch reveals RNA structural adaptability as basis for promiscuous ligand binding., Chan CW, Mondragon A, Nucleic Acids Res. 2020 Jun 16. pii: 5858114. doi: 10.1093/nar/gkaa507. PMID:32544228
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (74 Kb) [Save to disk]
  • Biological Unit Coordinates (6vmy.pdb1.gz) 68 Kb
  • LPC: Ligand-Protein Contacts for 6VMY
  • CSU: Contacts of Structural Units for 6VMY
  • Structure Factors (502 Kb)
  • Retrieve 6VMY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6VMY from S2C, [Save to disk]
  • View 6VMY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6vmy_A]
  • SWISS-PROT database:

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