6VPN date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSynthesis, structure, and activity of the antifungal plant defensin PvD1., Skalska J, Andrade VM, Cena GL, Harvey PJ, Gaspar DMD, Mello EO, Troeira Henriques S, Valle J, Gomes V, Conceicao K, Castanho MARB, Andreu D, J Med Chem. 2020 Aug 6. doi: 10.1021/acs.jmedchem.0c00543. PMID:32787086
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (231 Kb) [Save to disk]
  • Biological Unit Coordinates (6vpn.pdb1.gz) 12 Kb
  • CSU: Contacts of Structural Units for 6VPN
  • Original NMR restraints for 6VPN from PDB
  • Retrieve 6VPN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6VPN from S2C, [Save to disk]
  • View 6VPN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6vpn_A]
  • SWISS-PROT database:

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